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The uses of Molecular techniques in studying Australian subterranean termites Genus Coptotermes
2008 - IRG/WP 08-10669
This study focuses on applying molecular tools in studying the phylogeny of the Coptotermes, especially from the Australian region, by using a combined data set of three mitochondrial genes, viz. 16S, COII, COI, comprising a total of about 2000 base pairs. This study will address these following specific questions: i. Does molecular phylogenetics reveal any new species and show any previously ...
H M Badawi, B M Ahmed (Shiday), J R J French, M P Schwarz


Isolation and characterization of hydroxyl-radical-producing glycopeptide genes from the white-rot basidiomycete Phanerochaete chrysosporium
2006 - IRG/WP 06-10588
During wood decay, the white-rot basidiomycete Phanerochaete chrysosporium secretes low-molecular-weight glycopeptides that catalyze a redox reaction between O2 and electron donors to produce hydroxyl radical. This reaction accounts for most of the hydroxyl radical produced in wood-degrading cultures of P. chrysosporium. In combination with phenol oxidases, hydroxyl radical is believed to play a r...
H Tanaka, G Yoshida, Y Baba, K Matsumura, S Itakura, A Enoki


Genome-wide survey of cellulase related genes of white rot fungus,Pleurotus ostreatus
2007 - IRG/WP 07-10627
A white rot fungus, Pleurotus ostreatus, which is a important edible mushroom, has received much attention to apply to bioremediation and bioconversion because it has both cellulase and ligninase. To confirm copy number of cellulase-related genes encoded in P. ostreatus genome, we attempted to genomic Southern hybridization of P. ostreatus. The draft genome sequence and a large quantity of EST and...
T Tamenori, S Horisawa


Postia placenta gene expression of oxidative and carbohydrate metabolism related genes during growth in furfurylated wood
2009 - IRG/WP 09-10701
A range of studies the last decade have shown that modified wood can provide excellent protection against a range of wood deteriorating organisms, including decay fungi. However, we still lack information about why the modified wood is protected from microbial attack. Several hypotheses have been put forward e.g. inhibition of action of specific enzymes, but they still need testing. An understandi...
G Alfredsen, C G Fossdal


Postia placenta gene expression during growth in furfurylated wood
2010 - IRG/WP 10-10734
Modified wood can provide protection against a range of wood deteriorating organisms. But we still lack information about why the modified wood is protected from microbial attack. Several hypotheses have been put forward for the mode of action against wood decaying fungi, including inhibition of action of specific enzymes, but they still need further testing. In this study gene expression of the b...
G Alfredsen, C G Fossdal


Different levels of acetylation lead to groupwise upregulation of non-enzymatic wood degradation genes of Rhodonia placenta during initial brown-rot decay
2020 - IRG/WP 20-10958
Rhodonia placenta, often used as a model fungus to represent brown rot fungi, uses a two-stepped degradation mechanism to degrade wood. Regarding the overcoming of wood protection systems the initial degradation phase seems to be the crucial point. A new laboratory test enables the separation of the non-enzymatic oxidative and the enzymatic degradation phases, which has previously been proven chal...
M Kölle, R Ringman, A Pilgård


Metabolite analysis of fungal COS degradation and phylogenetic investigation of COSase genes
2023 - IRG/WP 23-11018
Fungi are the major species causing microbial deterioration that reduces the commercial value of wood, such as wood decay and surface contamination, so it is important to accumulate knowledge on the physiology of fungi in order to develop countermeasures against these problems. Most physiological studies of fungi that have been reported have concerned the metabolism of carbohydrates as a source of...
R Iizuka, S Hattori, I Ohtsu, D Hibbett, Y Katayama, M Yoshida